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Gene: Pygm (glycogen phosphorylase, muscle associated) Rattus norvegicus
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Symbol: Pygm
Name: glycogen phosphorylase, muscle associated
Description: Exhibits anion binding activity; carbohydrate binding activity; and glycogen phosphorylase activity. Involved in several processes, including glycogen catabolic process; response to cAMP; and response to hypoxia. Localizes to the sarcoplasmic reticulum. Used to study cholestasis. Human ortholog(s) of this gene implicated in glycogen storage disease V. Orthologous to human PYGM (glycogen phosphorylase, muscle associated); PARTICIPATES IN glycogen degradation pathway; insulin signaling pathway; starch and sucrose metabolic pathway; INTERACTS WITH 2,5-hexanedione; 6-propyl-2-thiouracil; acrylamide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: glycogen phosphorylase, muscle form; muscle (McArdle syndrome); muscle glycogen phosphorylase; Muscpho; myophosphorylase; Phosphorylase glycogen; Phosphorylase, glycogen; phosphorylase, glycogen, muscle
Orthologs:
Homo sapiens (human) : PYGM (glycogen phosphorylase, muscle associated)  HGNC  Alliance
Mus musculus (house mouse) : Pygm (muscle glycogen phosphorylase)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pygm (glycogen phosphorylase, muscle associated)
Pan paniscus (bonobo/pygmy chimpanzee) : PYGM (glycogen phosphorylase, muscle associated)
Canis lupus familiaris (dog) : PYGM (glycogen phosphorylase, muscle associated)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pygm (glycogen phosphorylase, muscle associated)
Sus scrofa (pig) : PYGM (glycogen phosphorylase, muscle associated)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01221,756,325 - 221,771,142 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01228,737,461 - 228,758,937 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41209,166,701 - 209,181,588 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11209,325,179 - 209,340,017 (+)NCBI
Celera1201,223,967 - 201,238,784 (+)NCBICelera
Cytogenetic Map1q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pygm
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 3461
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.