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Gene: Prph2 (peripherin 2) Rattus norvegicus
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Symbol: Prph2
Name: peripherin 2
Description: Involved in response to low light intensity stimulus. Predicted to localize to the integral component of plasma membrane and photoreceptor outer segment. Biomarker of retinal disease. Human ortholog(s) of this gene implicated in choroidal sclerosis; fundus albipunctatus; and retinal disease (multiple). Orthologous to human PRPH2 (peripherin 2); PARTICIPATES IN retinitis pigmentosa pathway; amyotrophic lateral sclerosis pathway; INTERACTS WITH 17alpha-ethynylestradiol; C60 fullerene; lead diacetate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Peripherin (retinal degradation slow); peripherin-2; Rds; retinal degeneration slow protein; retinal degeneration, slow; RSRDS
Orthologs:
Homo sapiens (human) : PRPH2 (peripherin 2)  HGNC  Alliance
Mus musculus (house mouse) : Prph2 (peripherin 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Prph2 (peripherin 2)
Pan paniscus (bonobo/pygmy chimpanzee) : PRPH2 (peripherin 2)
Canis lupus familiaris (dog) : PRPH2 (peripherin 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Prph2 (peripherin 2)
Sus scrofa (pig) : PRPH2 (peripherin 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0916,085,933 - 16,386,176 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0915,002,816 - 15,006,668 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.499,251,024 - 9,272,513 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.199,248,345 - 9,269,835 (-)NCBI
Celera911,815,281 - 11,829,854 (-)NCBICelera
Cytogenetic Map9q12NCBI
RH 3.4 Map960.5RGD
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Prph2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 3549
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.