Gene: Clec11a (C-type lectin domain containing 11A) Rattus norvegicus
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Symbol: Clec11a
Name: C-type lectin domain containing 11A
Description: Predicted to have growth factor activity; predicted to be involved in ossification and positive regulation of cell population proliferation; predicted to localize to the extracellular space; orthologous to human CLEC11A (C-type lectin domain containing 11A); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: C-type lectin domain family 11 member A; C-type lectin domain family 11, member A; lymphocyte secreted C-type lectin; osteolectin; Scgf; stem cell growth factor
Orthologs:
Homo sapiens (human) : CLEC11A (C-type lectin domain containing 11A)  HGNC  Alliance
Mus musculus (house mouse) : Clec11a (C-type lectin domain family 11, member a)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Clec11a (C-type lectin domain containing 11A)
Pan paniscus (bonobo/pygmy chimpanzee) : CLEC11A (C-type lectin domain containing 11A)
Canis lupus familiaris (dog) : CLEC11A (C-type lectin domain containing 11A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clec11a (C-type lectin domain containing 11A)
Sus scrofa (pig) : CLEC11A (C-type lectin domain containing 11A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01100,290,374 - 100,293,515 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01101,354,449 - 101,364,335 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4194,785,179 - 94,788,320 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1194,864,111 - 94,866,313 (-)NCBI
Celera189,064,393 - 89,067,534 (-)NCBICelera
Cytogenetic Map1q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Clec11a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 3627
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.