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Gene: Scn2b (sodium voltage-gated channel beta subunit 2) Rattus norvegicus
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Symbol: Scn2b
Name: sodium voltage-gated channel beta subunit 2
Description: Exhibits voltage-gated sodium channel activity. Involved in nervous system development and response to pyrethroid. Predicted to localize to the voltage-gated sodium channel complex. Used to study visual epilepsy. Biomarker of otitis media. Human ortholog(s) of this gene implicated in familial atrial fibrillation. Orthologous to human SCN2B (sodium voltage-gated channel beta subunit 2); INTERACTS WITH (+)-trans-(S)-allethrin; 1-naphthyl isothiocyanate; 3H-1,2-dithiole-3-thione.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: SCNB2; Sodium channel beta 2; sodium channel subunit beta-2; sodium channel, voltage-gated, type II, beta; sodium channel, voltage-gated, type II, beta polypeptide; sodium channel, voltage-gated, type II, beta subunit
Orthologs:
Homo sapiens (human) : SCN2B (sodium voltage-gated channel beta subunit 2)  HGNC  Alliance
Mus musculus (house mouse) : Scn2b (sodium channel, voltage-gated, type II, beta)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Scn2b (sodium voltage-gated channel beta subunit 2)
Pan paniscus (bonobo/pygmy chimpanzee) : SCN2B (sodium voltage-gated channel beta subunit 2)
Canis lupus familiaris (dog) : SCN2B (sodium voltage-gated channel beta subunit 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Scn2b (sodium voltage-gated channel beta subunit 2)
Sus scrofa (pig) : SCN2B (sodium voltage-gated channel beta subunit 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0849,419,003 - 49,431,110 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0848,045,397 - 48,057,559 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4848,068,843 - 48,078,632 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1848,077,608 - 48,087,398 (+)NCBI
Celera845,010,175 - 45,018,724 (+)NCBICelera
Cytogenetic Map8q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Scn2b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 3633
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.