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Gene: Snai2 (snail family transcriptional repressor 2) Rattus norvegicus
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Symbol: Snai2
Name: snail family transcriptional repressor 2
Description: Predicted to have DNA-binding transcription repressor activity, RNA polymerase II-specific; E-box binding activity; and chromatin binding activity. Involved in cellular response to fibroblast growth factor stimulus and negative regulation of transcription by RNA polymerase II. Predicted to localize to the cytoplasm and nuclear chromatin. Human ortholog(s) of this gene implicated in Waardenburg syndrome type 2D and piebaldism. Orthologous to human SNAI2 (snail family transcriptional repressor 2); INTERACTS WITH (S)-nicotine; 3-chloropropane-1,2-diol; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: neural crest transcription factor Slug; Slug; Slug chicken homolog; Slug, chicken homolog; snail family zinc finger 2; snail homolog 2; snail homolog 2 (Drosophila); zinc finger protein SNAI2
Orthologs:
Homo sapiens (human) : SNAI2 (snail family transcriptional repressor 2)  HGNC  Alliance
Mus musculus (house mouse) : Snai2 (snail family zinc finger 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Snai2 (snail family transcriptional repressor 2)
Pan paniscus (bonobo/pygmy chimpanzee) : SNAI2 (snail family transcriptional repressor 2)
Canis lupus familiaris (dog) : SNAI2 (snail family transcriptional repressor 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Snai2 (snail family transcriptional repressor 2)
Sus scrofa (pig) : SNAI2 (snail family transcriptional repressor 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01190,404,421 - 90,406,730 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01193,462,645 - 93,464,954 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1184,915,524 - 84,917,833 (-)NCBICelera
Cytogenetic Map11q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Snai2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 3722
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.