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Gene: Ssbp1 (single stranded DNA binding protein 1) Rattus norvegicus
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Symbol: Ssbp1
Name: single stranded DNA binding protein 1
Description: Predicted to have chromatin binding activity and single-stranded DNA binding activity. Predicted to be involved in DNA-dependent DNA replication; mitochondrion morphogenesis; and positive regulation of helicase activity. Predicted to localize to the mitochondrial nucleoid. Orthologous to human SSBP1 (single stranded DNA binding protein 1); PARTICIPATES IN DNA replication pathway; homologous recombination pathway of double-strand break repair; mismatch repair pathway; INTERACTS WITH 2,4-dinitrotoluene; 3H-1,2-dithiole-3-thione; ammonium chloride.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: mt-SSB; mtSSB; single strand DNA-binding protein P16; single-stranded DNA binding protein 1; single-stranded DNA binding protein 1, mitochondrial; Single-stranded DNA-binding protein; single-stranded DNA-binding protein, mitochondrial; Ssbp
Orthologs:
Homo sapiens (human) : SSBP1 (single stranded DNA binding protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Ssbp1 (single-stranded DNA binding protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ssbp1 (single stranded DNA binding protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SSBP1 (single stranded DNA binding protein 1)
Canis lupus familiaris (dog) : SSBP1 (single stranded DNA binding protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ssbp1 (single stranded DNA binding protein 1)
Sus scrofa (pig) : SSBP1 (single stranded DNA binding protein 1)
Chlorocebus sabaeus (African green monkey) : SSBP1 (single stranded DNA binding protein 1)
Heterocephalus glaber (naked mole-rat) : Ssbp1 (single stranded DNA binding protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0468,634,844 - 68,645,112 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl468,634,929 - 68,645,172 (+)Ensembl
Rnor_5.04133,421,333 - 133,430,764 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4468,027,304 - 68,036,581 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1468,302,749 - 68,312,711 (+)NCBI
Celera464,269,091 - 64,279,111 (+)NCBICelera
Cytogenetic Map4q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Ssbp1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 3760
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.