Gene: Syn1 (synapsin I) Rattus norvegicus
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Symbol: Syn1
Name: synapsin I
Description: Exhibits calcium-dependent protein binding activity; involved in neuron development and synapse organization; localizes to the cytoplasm, dendrite, and presynaptic active zone; orthologous to human SYN1 (synapsin I); INTERACTS WITH 17alpha-ethynylestradiol; 4-aminopyridine; ammonium chloride.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: synapsin 1; synapsin-1
Orthologs:
Homo sapiens (human) : SYN1 (synapsin I)  HGNC  Alliance
Mus musculus (house mouse) : Syn1 (synapsin I)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Syn1 (synapsin I)
Pan paniscus (bonobo/pygmy chimpanzee) : SYN1 (synapsin I)
Canis lupus familiaris (dog) : SYN1 (synapsin I)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Syn1 (synapsin I)
Sus scrofa (pig) : SYN1 (synapsin I)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X1,321,315 - 1,379,202 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X2,136,336 - 2,194,393 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X12,512,241 - 12,556,160 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X12,585,157 - 12,585,610 (-)NCBI
CeleraX1,741,094 - 1,795,235 (+)NCBICelera
Cytogenetic MapXq11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Syn1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 3797
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.