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Gene: Tnp1 (transition protein 1) Rattus norvegicus
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Symbol: Tnp1
Name: transition protein 1
Description: Predicted to have DNA binding activity. Predicted to be involved in several processes, including chromatin organization; single strand break repair; and spermatid nucleus elongation. Localizes to the male germ cell nucleus. Orthologous to human TNP1 (transition protein 1); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: spermatid nuclear transition protein 1; STP-1; testis-specific basic protein; TP-1
Orthologs:
Homo sapiens (human) : TNP1 (transition protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Tnp1 (transition protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tnp1 (transition protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : TNP1 (transition protein 1)
Canis lupus familiaris (dog) : TNP1 (transition protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tnp1 (transition protein 1)
Sus scrofa (pig) : TNP1 (transition protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0980,294,837 - 80,295,446 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0980,066,299 - 80,066,908 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4972,397,750 - 72,398,359 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1972,544,732 - 72,545,341 (-)NCBI
Celera972,188,091 - 72,188,700 (-)NCBICelera
Cytogenetic Map9q33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Tnp1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 3884
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.