Gene: Tub (tubby bipartite transcription factor) Rattus norvegicus
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Symbol: Tub
Name: tubby bipartite transcription factor
Description: Predicted to have phosphatidylinositol binding activity; involved in response to hormone; predicted to localize to the cilium, cytosol, and extracellular region; orthologous to human TUB (tubby bipartite transcription factor); INTERACTS WITH 17alpha-ethynylestradiol; 6-propyl-2-thiouracil; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Tubby (mouse) homolog; tubby homolog (mouse); tubby protein homolog
Orthologs:
Homo sapiens (human) : TUB (TUB bipartite transcription factor)  HGNC  Alliance
Mus musculus (house mouse) : Tub (tubby bipartite transcription factor)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tub (TUB bipartite transcription factor)
Pan paniscus (bonobo/pygmy chimpanzee) : TUB (TUB bipartite transcription factor)
Canis lupus familiaris (dog) : TUB (tubby bipartite transcription factor)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tub (TUB bipartite transcription factor)
Sus scrofa (pig) : TUB (TUB bipartite transcription factor)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01173,550,929 - 173,629,550 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01180,541,359 - 180,618,745 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1160,923,600 - 160,933,169 (+)NCBICelera
Cytogenetic Map1q33NCBI
RH 3.4 Map11355.4RGD
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tub
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 3918
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.