Gene: Scgb1a1 (secretoglobin family 1A member 1) Rattus norvegicus
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Symbol: Scgb1a1
Name: secretoglobin family 1A member 1
Description: Exhibits polychlorinated biphenyl binding activity; involved in several processes, including response to cytokine, response to fibroblast growth factor, and response to glucocorticoid; localizes to the cytoplasm, extracellular space, and intracellular organelle; biomarker of acute kidney failure, asthma, otitis media, and pulmonary fibrosis; orthologous to human SCGB1A1 (secretoglobin family 1A member 1); PARTICIPATES IN forkhead class A signaling pathway; INTERACTS WITH 17alpha-ethynylestradiol; 17beta-estradiol; 4-amino-2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: CC10; CCPBP; CCSP; clara cell phospholipid-binding protein; clara cells 10 kDa secretory protein; PCB-binding protein; PCBB; secretoglobin, family 1A, member 1; secretoglobin, family 1A, member 1 (uteroglobin); Ugb; uteroglobin; Uteroglobin (Clara cell secretory protein)
Orthologs:
Homo sapiens (human) : SCGB1A1 (secretoglobin family 1A member 1)  HGNC  Alliance
Mus musculus (house mouse) : Scgb1a1 (secretoglobin, family 1A, member 1 (uteroglobin))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Scgb1a1 (secretoglobin family 1A member 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SCGB1A1 (secretoglobin family 1A member 1)
Canis lupus familiaris (dog) : SCGB1A1 (secretoglobin family 1A member 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Scgb1a1 (secretoglobin family 1A member 1)
Sus scrofa (pig) : SCGB1A1 (secretoglobin family 1A member 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01225,279,698 - 225,283,246 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01232,216,740 - 232,220,289 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41211,758,103 - 211,761,651 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11211,916,532 - 211,920,081 (-)NCBI
Celera1203,487,454 - 203,490,852 (-)NCBICelera
Cytogenetic Map1q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Scgb1a1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 3934
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.