Gene: Vcam1 (vascular cell adhesion molecule 1) Rattus norvegicus
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Symbol: Vcam1
Name: vascular cell adhesion molecule 1
Description: Exhibits integrin binding activity; involved in several processes, including acute inflammatory response, aging, and nervous system development; localizes to the cell surface, extracellular space, and sarcolemma; used to study carotid stenosis; biomarker of several diseases, including artery disease (multiple), chronic kidney disease, colitis, familial hyperlipidemia, and periodontitis; orthologous to human VCAM1 (vascular cell adhesion molecule 1); PARTICIPATES IN eicosanoid signaling pathway; malaria pathway; sleeping sickness pathway; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; (S)-colchicine; 1,2-dimethylhydrazine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MGC108734; V-CAM 1; vascular cell adhesion protein 1; VCAM-1; VCAM1B
Orthologs:
Homo sapiens (human) : VCAM1 (vascular cell adhesion molecule 1)  HGNC  Alliance
Mus musculus (house mouse) : Vcam1 (vascular cell adhesion molecule 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vcam1 (vascular cell adhesion molecule 1)
Pan paniscus (bonobo/pygmy chimpanzee) : VCAM1 (vascular cell adhesion molecule 1)
Canis lupus familiaris (dog) : VCAM1 (vascular cell adhesion molecule 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vcam1 (vascular cell adhesion molecule 1)
Sus scrofa (pig) : VCAM1 (vascular cell adhesion molecule 1)
more info ...
Is Marker For: Strains:   SHRSP.WKY-(D2Rat13-D2Rat157)/Gcrc   SHRSP.WKY-(D2Mit21-D2Rat157)/Gcrc  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02219,071,193 - 219,090,931 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02237,158,192 - 237,177,779 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42212,277,654 - 212,297,376 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12212,240,407 - 212,260,130 (-)NCBI
Celera2196,537,457 - 196,557,044 (-)NCBICelera
Cytogenetic Map2q41NCBI
RH 3.4 Map21480.6RGD
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Candidate Gene Status
Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Related Rat Strains
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Vcam1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 3952
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.