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Gene: Vcsa2 (variable coding sequence A2) Rattus norvegicus
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Symbol: Vcsa2
Name: variable coding sequence A2
Description: Predicted to have endopeptidase inhibitor activity. Predicted to be involved in regulation of sensory perception of pain. Predicted to localize to the extracellular region; INTERACTS WITH ammonium chloride; methamphetamine; trichloroethene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: SMR1-alpha2; VCS-alpha2
Orthologs:
No known orthologs. homologs ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01421,558,489 - 21,564,115 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1421,558,489 - 21,615,488 (-)Ensembl
Rnor_5.01421,466,929 - 21,472,555 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41421,438,442 - 21,444,907 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11421,438,441 - 21,444,907 (-)NCBI
Celera1419,176,400 - 19,182,865 (-)NCBICelera
Cytogenetic Map14p22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Vcsa2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 3954
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.