Gene: Vdr (vitamin D receptor) Rattus norvegicus
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Symbol: Vdr
Name: vitamin D receptor
Description: Exhibits calcitriol binding activity, nuclear receptor activity, and sequence-specific DNA binding activity; predicted to contribute to DNA-binding transcription factor activity and vitamin D response element binding activity; involved in several processes, including aging, apoptotic signaling pathway, and cellular response to amyloid-beta; localizes to the T-tubule, cytoplasm, and intracellular organelle; colocalizes with the caveola; biomarker of secondary hyperparathyroidism; orthologous to human VDR (vitamin D receptor); PARTICIPATES IN altered p53 signaling pathway; tuberculosis pathway; INTERACTS WITH (+)-pilocarpine; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 1,25-dihydroxyvitamin D3 receptor; Nr1i1; nuclear receptor subfamily 1 group I member 1; vitamin D (1,25- dihydroxyvitamin D3) receptor; Vitamin D (1,25-dihydroxyvitamin D3) receptor; Vitamin D (125-dihydroxyvitamin D3) receptor; vitamin D3 receptor
Orthologs:
Homo sapiens (human) : VDR (vitamin D receptor)  HGNC  Alliance
Mus musculus (house mouse) : Vdr (vitamin D (1,25-dihydroxyvitamin D3) receptor)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vdr (vitamin D receptor)
Pan paniscus (bonobo/pygmy chimpanzee) : VDR (vitamin D receptor)
Canis lupus familiaris (dog) : VDR (vitamin D receptor)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vdr (vitamin D receptor)
Sus scrofa (pig) : VDR (vitamin D receptor)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07139,344,452 - 139,394,138 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.07139,536,241 - 139,585,928 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47136,567,614 - 136,617,280 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17136,644,050 - 136,693,717 (-)NCBI
Celera7125,479,125 - 125,528,679 (-)NCBICelera
Cytogenetic Map7q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Vdr
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 3959
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-05-07
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.