Gene: Vldlr (very low density lipoprotein receptor) Rattus norvegicus
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Symbol: Vldlr
Name: very low density lipoprotein receptor
Description: Predicted to have several functions, including apolipoprotein binding activity, calcium-dependent protein binding activity, and glycoprotein transporter activity; involved in several processes, including animal organ development, cellular response to glucose starvation, and cellular response to hypoxia; localizes to several cellular components, including the apical part of cell, cell surface, and nucleus; biomarker of focal segmental glomerulosclerosis and nephrotic syndrome; orthologous to human VLDLR (very low density lipoprotein receptor); PARTICIPATES IN altered Reelin signaling pathway; Reelin signaling pathway; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 17alpha-ethynylestradiol; 2,2',4,4'-Tetrabromodiphenyl ether.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: very low-density lipoprotein receptor; VLDL receptor; VLDL-R
Orthologs:
Homo sapiens (human) : VLDLR (very low density lipoprotein receptor)  HGNC  Alliance
Mus musculus (house mouse) : Vldlr (very low density lipoprotein receptor)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vldlr (very low density lipoprotein receptor)
Pan paniscus (bonobo/pygmy chimpanzee) : VLDLR (very low density lipoprotein receptor)
Canis lupus familiaris (dog) : VLDLR (very low density lipoprotein receptor)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vldlr (very low density lipoprotein receptor)
Sus scrofa (pig) : VLDLR (very low density lipoprotein receptor)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01245,236,819 - 245,273,688 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01252,485,275 - 252,523,202 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41230,666,736 - 230,697,748 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11230,830,758 - 230,861,771 (+)NCBI
Celera1222,002,111 - 222,033,270 (+)NCBICelera
Cytogenetic Map1q52NCBI
RH 3.4 Map11610.4RGD
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Vldlr
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 3963
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-05-14
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.