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Gene: SOX1-OT (SOX1 overlapping transcript) Homo sapiens
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Symbol: SOX1-OT
Name: SOX1 overlapping transcript
Description: INTERACTS WITH aflatoxin B1; benzo[a]pyrene; herbicide
Type: ncrna
RefSeq Status: VALIDATED
Also known as: LINC00403; long intergenic non-protein coding RNA 403
Orthologs:
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3813111,972,310 - 112,108,015 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3713112,760,736 - 112,762,329 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map13q34NCBI
HuRef1393,211,800 - 93,224,342 (+)NCBIHuRef
CHM1_113112,595,648 - 112,731,555 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on SOX1-OT
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 5488928
Created: 2011-09-01
Species: Homo sapiens
Last Modified: 2019-11-26
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.