Gene: Pdpn (podoplanin) Rattus norvegicus
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Symbol: Pdpn
Name: podoplanin
Description: Predicted to have chaperone binding activity, chemokine binding activity, and signaling receptor binding activity; involved in several processes, including cell adhesion, inflammatory response, and lung development; localizes to the apical plasma membrane; biomarker of adult respiratory distress syndrome, bacterial pneumonia, nephrosis, and oligohydramnios; orthologous to human PDPN (podoplanin); INTERACTS WITH (RS)-amphetamine; 2,3,7,8-tetrachlorodibenzodioxine; 3'-amino-3'-deoxy-N(6),N(6)-dimethyladenosine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: E11; E11 antigen epitope; epithelial cell surface transmembrane protein antigen; glycoprotein 38; Gp38; OTS-8; pulmonary type I alveolar epithelial cell transmembrane differentiation marker; RTI140; RTI40; T1-alpha; T1A; type I cell 40 kDa protein
Orthologs:
Homo sapiens (human) : PDPN (podoplanin)  HGNC  Alliance
Mus musculus (house mouse) : Pdpn (podoplanin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pdpn (podoplanin)
Pan paniscus (bonobo/pygmy chimpanzee) : PDPN (podoplanin)
Canis lupus familiaris (dog) : PDPN (podoplanin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pdpn (podoplanin)
Sus scrofa (pig) : PDPN (podoplanin)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05161,947,137 - 161,981,441 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05165,646,114 - 165,679,595 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45162,142,251 - 162,175,921 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15162,152,438 - 162,186,109 (-)NCBI
Celera5153,929,730 - 153,964,026 (-)NCBICelera
Cytogenetic Map5q36NCBI
RH 3.4 Map51057.9RGD
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Pdpn
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 61819
Created: 2001-04-11
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.