Gene: Ptma (prothymosin alpha) Rattus norvegicus
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Symbol: Ptma
Name: prothymosin alpha
Description: Predicted to have activating transcription factor binding activity and histone binding activity; involved in negative regulation of cysteine-type endopeptidase activity involved in apoptotic process, positive regulation of NF-kappaB transcription factor activity, and positive regulation of transcription by RNA polymerase II; predicted to localize to the cytosol and nucleoplasm; orthologous to human PTMA (prothymosin alpha); INTERACTS WITH 1-naphthyl isothiocyanate; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: alpha-prothymosin; prothymosin-alpha
Orthologs:
Homo sapiens (human) : PTMA (prothymosin alpha)  HGNC  Alliance
Mus musculus (house mouse) : Ptma (prothymosin alpha)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ptma (prothymosin alpha)
Pan paniscus (bonobo/pygmy chimpanzee) : LOC103786665 (prothymosin alpha)
Canis lupus familiaris (dog) : PTMA (prothymosin alpha)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ptma (prothymosin alpha)
Sus scrofa (pig) : PTMA (prothymosin alpha)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0993,545,396 - 93,549,436 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0993,273,333 - 93,277,373 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4985,291,203 - 85,295,242 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1985,474,621 - 85,478,661 (+)NCBI
Celera984,591,345 - 84,595,385 (+)NCBICelera
Cytogenetic Map9q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Ptma
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 61829
Created: 2001-04-11
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.