Gene: Tgm1 (transglutaminase 1) Rattus norvegicus
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Symbol: Tgm1
Name: transglutaminase 1
Description: Predicted to have protein-glutamine gamma-glutamyltransferase activity; predicted to be involved in several processes, including animal organ development, peptide cross-linking, and positive regulation of cell cycle; predicted to localize to the cell-cell adherens junction and intrinsic component of membrane; orthologous to human TGM1 (transglutaminase 1); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: epidermal TGase; glutamine gamma-glutamyltransferase K; protein-glutamine gamma-glutamyltransferase K; TG(K); TGase K; TGase-1; TGK; transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase); transglutaminase 1 K polypeptide; transglutaminase 1, K polypeptide; transglutaminase K; transglutaminase-1
Orthologs:
Homo sapiens (human) : TGM1 (transglutaminase 1)  HGNC  Alliance
Mus musculus (house mouse) : Tgm1 (transglutaminase 1, K polypeptide)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : TGM1 (transglutaminase 1)
Canis lupus familiaris (dog) : TGM1 (transglutaminase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tgm1 (transglutaminase 1)
Sus scrofa (pig) : TGM1 (transglutaminase 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01534,378,136 - 34,393,150 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01538,268,112 - 38,282,132 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41533,846,367 - 33,859,615 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11533,862,066 - 33,875,315 (-)NCBI
Celera1528,767,463 - 28,780,710 (-)NCBICelera
Cytogenetic Map15p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Tgm1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 61838
Created: 2001-04-11
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.