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Gene: Psmb5 (proteasome 20S subunit beta 5) Rattus norvegicus
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Symbol: Psmb5
Name: proteasome 20S subunit beta 5
Description: Predicted to have endopeptidase activity. Predicted to be involved in proteasomal ubiquitin-independent protein catabolic process; proteasome-mediated ubiquitin-dependent protein catabolic process; and response to oxidative stress. Predicted to localize to several cellular components, including the centrosome; nucleoplasm; and proteasome core complex, beta-subunit complex. Orthologous to human PSMB5 (proteasome 20S subunit beta 5); PARTICIPATES IN ubiquitin/proteasome degradation pathway; INTERACTS WITH 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane; 1,3-dinitrobenzene; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: macropain epsilon chain; multicatalytic endopeptidase complex epsilon chain; proteasome (prosome, macropain) subunit, beta type 5; proteasome beta 5 subunit; proteasome beta type subunit 5; proteasome chain 6; proteasome epsilon chain; proteasome subunit beta 5; proteasome subunit beta type-5; proteasome subunit X
Orthologs:
Homo sapiens (human) : PSMB5 (proteasome 20S subunit beta 5)  HGNC  Alliance
Mus musculus (house mouse) : Psmb5 (proteasome (prosome, macropain) subunit, beta type 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Psmb5 (proteasome 20S subunit beta 5)
Pan paniscus (bonobo/pygmy chimpanzee) : PSMB5 (proteasome 20S subunit beta 5)
Canis lupus familiaris (dog) : PSMB5 (proteasome subunit beta 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Psmb5 (proteasome 20S subunit beta 5)
Sus scrofa (pig) : PSMB5 (proteasome 20S subunit beta 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01533,259,039 - 33,263,634 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1533,259,043 - 33,263,659 (-)Ensembl
Rnor_5.01537,143,058 - 37,147,105 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41532,689,859 - 32,694,364 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11532,705,562 - 32,710,051 (-)NCBI
Celera1527,651,286 - 27,655,779 (-)NCBICelera
Cytogenetic Map15p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Psmb5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 61879
Created: 2001-04-11
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.