Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Vamp3 (vesicle-associated membrane protein 3) Rattus norvegicus
Analyze
Symbol: Vamp3
Name: vesicle-associated membrane protein 3
Description: Exhibits syntaxin-1 binding activity. Involved in protein-containing complex assembly. Localizes to several cellular components, including the SNARE complex; apical plasma membrane; and cytoplasmic vesicle. Orthologous to human VAMP3 (vesicle associated membrane protein 3); PARTICIPATES IN autophagy pathway; phagocytosis pathway; INTERACTS WITH 1,2,4-trimethylbenzene; 3H-1,2-dithiole-3-thione; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: CEB; cellubrevin; MGC108618; synaptobrevin-3; VAMP-3
Orthologs:
Homo sapiens (human) : VAMP3 (vesicle associated membrane protein 3)  HGNC  Alliance
Mus musculus (house mouse) : Vamp3 (vesicle-associated membrane protein 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vamp3 (vesicle associated membrane protein 3)
Pan paniscus (bonobo/pygmy chimpanzee) : VAMP3 (vesicle associated membrane protein 3)
Canis lupus familiaris (dog) : VAMP3 (vesicle associated membrane protein 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vamp3 (vesicle associated membrane protein 3)
Sus scrofa (pig) : VAMP3 (vesicle associated membrane protein 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05168,126,157 - 168,136,628 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05171,703,252 - 171,713,723 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45168,190,569 - 168,201,165 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15168,200,756 - 168,386,085 (-)NCBI
Celera5159,750,283 - 159,760,878 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Vamp3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 61880
Created: 2001-04-11
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.