Gene: Ptafr (platelet-activating factor receptor) Rattus norvegicus
Analyze
Symbol: Ptafr
Name: platelet-activating factor receptor
Description: Exhibits mitogen-activated protein kinase binding activity and platelet activating factor receptor activity; involved in several processes, including cellular response to lipid, positive regulation of transport, and regulation of cellular biosynthetic process; localizes to the plasma membrane; used to study several diseases, including acute kidney failure, glomerulonephritis, neutropenia, perinatal necrotizing enterocolitis, and pleurisy; biomarker of conjunctivitis, sciatic neuropathy, and transient cerebral ischemia; orthologous to human PTAFR (platelet activating factor receptor); PARTICIPATES IN calcium/calcium-mediated signaling pathway; Staphylococcus aureus infection pathway; INTERACTS WITH (RS)-amphetamine; 1-naphthyl isothiocyanate; 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: PAF-R; PAFr
Orthologs:
Homo sapiens (human) : PTAFR (platelet activating factor receptor)  HGNC  Alliance
Mus musculus (house mouse) : Ptafr (platelet-activating factor receptor)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ptafr (platelet activating factor receptor)
Pan paniscus (bonobo/pygmy chimpanzee) : PTAFR (platelet activating factor receptor)
Canis lupus familiaris (dog) : PTAFR (platelet activating factor receptor)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ptafr (platelet activating factor receptor)
Sus scrofa (pig) : PTAFR (platelet activating factor receptor)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05150,746,284 - 150,775,675 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05154,414,542 - 154,443,798 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45152,565,687 - 152,587,342 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15152,575,728 - 152,597,381 (-)NCBI
Celera5143,199,712 - 143,221,168 (+)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Ptafr
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 61897
Created: 2001-04-11
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.