Gene: Slc6a6 (solute carrier family 6 member 6) Rattus norvegicus
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Symbol: Slc6a6
Name: solute carrier family 6 member 6
Description: Exhibits taurine binding activity and taurine:sodium symporter activity; involved in taurine transport; predicted to localize to the GABA-ergic synapse and integral component of postsynaptic membrane; orthologous to human SLC6A6 (solute carrier family 6 member 6); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1-benzylpiperazine; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: sodium- and chloride-dependent taurine transporter; Solute carrier 6 ,member 6 (taurine transporter); Solute carrier 6 member 6 (taurine transporter); solute carrier family 6 (neurotransmitter transporter), member 6; solute carrier family 6 (neurotransmitter transporter, taurine), member 6; solute carrier family 6, member 6; taurine/beta-alanine transporter
Orthologs:
Homo sapiens (human) : SLC6A6 (solute carrier family 6 member 6)  HGNC  Alliance
Mus musculus (house mouse) : Slc6a6 (solute carrier family 6 (neurotransmitter transporter, taurine), member 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc6a6 (solute carrier family 6 member 6)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC6A6 (solute carrier family 6 member 6)
Canis lupus familiaris (dog) : SLC6A6 (solute carrier family 6 member 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc6a6 (solute carrier family 6 member 6)
Sus scrofa (pig) : SLC6A6 (solute carrier family 6 member 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04123,638,619 - 123,713,469 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04188,172,660 - 188,246,142 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44125,875,817 - 125,945,795 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14126,120,297 - 126,190,631 (+)NCBI
Celera4113,114,633 - 113,184,598 (+)NCBICelera
Cytogenetic Map4q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Slc6a6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 61912
Created: 2001-04-11
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.