Gene: Slc30a1 (solute carrier family 30 member 1) Rattus norvegicus
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Symbol: Slc30a1
Name: solute carrier family 30 member 1
Description: Exhibits calcium channel inhibitor activity and zinc ion transmembrane transporter activity; involved in cation transport, detoxification of cadmium ion, and negative regulation of neurotransmitter secretion; localizes to the Schaffer collateral - CA1 synapse, T-tubule, and integral component of postsynaptic density membrane; orthologous to human SLC30A1 (solute carrier family 30 member 1); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2-methoxyethanol; aldehydo-D-glucose.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: solute carrier family 30 (zinc transporter) member 1; solute carrier family 30 (zinc transporter), member 1; solute carrier family 30, member 1; zinc transporter 1; znT-1
Orthologs:
Homo sapiens (human) : SLC30A1 (solute carrier family 30 member 1)  HGNC  Alliance
Mus musculus (house mouse) : Slc30a1 (solute carrier family 30 (zinc transporter), member 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc30a1 (solute carrier family 30 member 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC30A1 (solute carrier family 30 member 1)
Canis lupus familiaris (dog) : SLC30A1 (solute carrier family 30 member 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc30a1 (solute carrier family 30 member 1)
Sus scrofa (pig) : SLC30A1 (solute carrier family 30 member 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.013110,677,810 - 110,681,683 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.013115,236,547 - 115,240,420 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.413107,980,864 - 107,986,519 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.113108,169,967 - 108,175,623 (+)NCBI
Celera13102,913,629 - 102,934,174 (+)NCBICelera
Cytogenetic Map13q27NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Slc30a1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 61918
Created: 2001-04-11
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.