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Gene: Pou3f4 (POU class 3 homeobox 4) Rattus norvegicus
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Symbol: Pou3f4
Name: POU class 3 homeobox 4
CRRD ID: 61947
Description: Exhibits AT DNA binding activity and DNA-binding transcription factor activity. Involved in transcription by RNA polymerase II. Localizes to nucleus. Human ortholog(s) of this gene implicated in X-linked deafness 2. Orthologous to human POU3F4 (POU class 3 homeobox 4); INTERACTS WITH 6-propyl-2-thiouracil; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: brain-4; brain-specific homeobox/POU domain protein 4; brn-4; oct-9; octamer-binding protein 9; octamer-binding transcription factor 9; OTF-9; POU domain, class 3, transcription factor 4; RHS2; RHS2 class III POU protein
Orthologs:
Homo sapiens (human) : POU3F4 (POU class 3 homeobox 4)  HGNC  Alliance
Mus musculus (house mouse) : Pou3f4 (POU domain, class 3, transcription factor 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pou3f4 (POU class 3 homeobox 4)
Pan paniscus (bonobo/pygmy chimpanzee) : POU3F4 (POU class 3 homeobox 4)
Canis lupus familiaris (dog) : POU3F4 (POU class 3 homeobox 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pou3f4 (POU class 3 homeobox 4)
Sus scrofa (pig) : POU3F4 (POU class 3 homeobox 4)
Chlorocebus sabaeus (African green monkey) : POU3F4 (POU class 3 homeobox 4)
Heterocephalus glaber (naked mole-rat) : Pou3f4 (POU class 3 homeobox 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X82,143,789 - 82,145,066 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX82,143,789 - 82,145,066 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X82,301,578 - 82,302,855 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X99,214,446 - 99,215,723 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X99,287,906 - 99,289,156 (+)NCBI
CeleraX77,112,524 - 77,113,801 (+)NCBICelera
Cytogenetic MapXq31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Pou3f4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 61947
Created: 2001-04-11
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.