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Gene: Gtf2b (general transcription factor IIB) Rattus norvegicus
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Symbol: Gtf2b
Name: general transcription factor IIB
Description: Predicted to have several functions, including RNA polymerase II complex recruiting activity; RNA polymerase II core promoter sequence-specific DNA binding activity; and transcription factor binding activity. Predicted to be involved in several processes, including RNA polymerase II core complex assembly; positive regulation by host of viral transcription; and transcription initiation from RNA polymerase II promoter. Predicted to localize to the chromosome; nucleoplasm; and transcriptional preinitiation complex. Orthologous to human GTF2B (general transcription factor IIB); PARTICIPATES IN RNA polymerase II transcription initiation pathway; INTERACTS WITH 2,4-dinitrotoluene; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: general transcription factor TFIIB; RNA polymerase II alpha initiation factor; transcription initiation factor IIB
Orthologs:
Homo sapiens (human) : GTF2B (general transcription factor IIB)  HGNC  Alliance
Mus musculus (house mouse) : Gtf2b (general transcription factor IIB)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Gtf2b (general transcription factor IIB)
Pan paniscus (bonobo/pygmy chimpanzee) : GTF2B (general transcription factor IIB)
Canis lupus familiaris (dog) : GTF2B (general transcription factor IIB)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Gtf2b (general transcription factor IIB)
Sus scrofa (pig) : GTF2B (general transcription factor IIB)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02248,709,433 - 248,727,741 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02267,239,559 - 267,257,867 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42240,877,342 - 240,895,650 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12240,864,081 - 240,882,390 (+)NCBI
Celera2223,777,527 - 223,795,808 (+)NCBICelera
Cytogenetic Map2q44NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Gtf2b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 619735
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.