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Gene: Cdh17 (cadherin 17) Rattus norvegicus
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Symbol: Cdh17
Name: cadherin 17
CRRD ID: 619748
Description: Predicted to have calcium ion binding activity; cell adhesion molecule binding activity; and proton-dependent oligopeptide secondary active transmembrane transporter activity. Predicted to be involved in several processes, including calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules; cell surface receptor signaling pathway; and hematopoietic or lymphoid organ development. Localizes to basolateral plasma membrane. Orthologous to human CDH17 (cadherin 17); INTERACTS WITH (+)-schisandrin B; 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: cadherin-17; LI-cadherin; liver-intestine cadherin
Orthologs:
Homo sapiens (human) : CDH17 (cadherin 17)  HGNC  Alliance
Mus musculus (house mouse) : Cdh17 (cadherin 17)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cdh17 (cadherin 17)
Pan paniscus (bonobo/pygmy chimpanzee) : CDH17 (cadherin 17)
Canis lupus familiaris (dog) : CDH17 (cadherin 17)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cdh17 (cadherin 17)
Sus scrofa (pig) : CDH17 (cadherin 17)
Chlorocebus sabaeus (African green monkey) : CDH17 (cadherin 17)
Heterocephalus glaber (naked mole-rat) : Cdh17 (cadherin 17)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0525,354,187 - 25,443,675 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl525,391,115 - 25,443,718 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0530,100,327 - 30,152,651 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4526,047,222 - 26,099,173 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1526,047,170 - 26,099,164 (+)NCBI
Celera524,595,130 - 24,647,265 (+)NCBICelera
Cytogenetic Map5q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Cdh17
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 619748
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.