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Gene: Trpc1 (transient receptor potential cation channel, subfamily C, member 1) Rattus norvegicus
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Symbol: Trpc1
Name: transient receptor potential cation channel, subfamily C, member 1
Description: Predicted to have inositol 1,4,5 trisphosphate binding activity; ion channel binding activity; and store-operated calcium channel activity. Involved in cellular response to hypoxia. Predicted to localize to several cellular components, including the basolateral plasma membrane; membrane raft; and myofibril. Biomarker of type 2 diabetes mellitus. Orthologous to human TRPC1 (transient receptor potential cation channel subfamily C member 1); PARTICIPATES IN calcium/calcium-mediated signaling pathway; glutamate signaling pathway; INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; bisphenol A; calcium atom.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: short transient receptor potential channel 1; transient receptor protein 1; TRP-1; Trrp1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08103,503,982 - 103,554,905 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.08102,955,430 - 103,005,377 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.08102,953,764 - 102,954,177 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48100,770,833 - 100,821,420NCBIRGSC3.4rn4RGSC3.4
Celera895,710,876 - 95,759,508 (-)NCBICelera
Cytogenetic Map8q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Trpc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 619783
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.