Gene: Xrcc1 (X-ray repair cross complementing 1) Rattus norvegicus
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Symbol: Xrcc1
Name: X-ray repair cross complementing 1
Description: Predicted to contribute to 3' overhang single-stranded DNA endodeoxyribonuclease activity; involved in several processes, including base-excision repair, response to drug, and response to hypoxia; localizes to the nucleus; used to study in situ carcinoma; biomarker of asphyxia neonatorum, transient cerebral ischemia, and visual epilepsy; orthologous to human XRCC1 (X-ray repair cross complementing 1); PARTICIPATES IN base excision repair pathway; nucleotide excision repair pathway; INTERACTS WITH (+)-pilocarpine; 2,3,7,8-tetrachlorodibenzodioxine; 4-hydroperoxycyclophosphamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: DNA repair protein XRCC1; X-ray repair complementing defective repair in Chinese hamster cells 1; x-ray repair cross-complementing group 1 protein; X-ray repair cross-complementing protein 1
Orthologs:
Homo sapiens (human) : XRCC1 (X-ray repair cross complementing 1)  HGNC  Alliance
Mus musculus (house mouse) : Xrcc1 (X-ray repair complementing defective repair in Chinese hamster cells 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Xrcc1 (X-ray repair cross complementing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : XRCC1 (X-ray repair cross complementing 1)
Canis lupus familiaris (dog) : XRCC1 (X-ray repair cross complementing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Xrcc1 (X-ray repair cross complementing 1)
Sus scrofa (pig) : XRCC1 (X-ray repair cross complementing 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0181,412,635 - 81,441,680 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0182,673,571 - 82,701,082 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4179,834,167 - 79,860,300 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1179,912,277 - 79,938,411 (+)NCBI
Celera174,594,313 - 74,621,523 (+)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Xrcc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 619823
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.