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Gene: Pabpc1 (poly(A) binding protein, cytoplasmic 1) Rattus norvegicus
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Symbol: Pabpc1
Name: poly(A) binding protein, cytoplasmic 1
Description: Exhibits mRNA binding activity. Predicted to be involved in gene silencing by RNA; positive regulation of viral genome replication; and regulation of mRNA catabolic process. Localizes to the dendrite and messenger ribonucleoprotein complex. Orthologous to human PABPC1 (poly(A) binding protein cytoplasmic 1); PARTICIPATES IN microRNA pathway; translation initiation pathway; mRNA decay pathway; INTERACTS WITH 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane; 17alpha-ethynylestradiol; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MGC91496; Pabp; PABP 1; PABP-1; Pabp1; poly(A)-binding protein 1; polyadenylate-binding protein 1
Orthologs:
Homo sapiens (human) : PABPC1 (poly(A) binding protein cytoplasmic 1)  HGNC  Alliance
Mus musculus (house mouse) : Pabpc1 (poly(A) binding protein, cytoplasmic 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pabpc1 (poly(A) binding protein cytoplasmic 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PABPC1 (poly(A) binding protein cytoplasmic 1)
Canis lupus familiaris (dog) : PABPC1 (poly(A) binding protein cytoplasmic 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pabpc1 (poly(A) binding protein cytoplasmic 1)
Sus scrofa (pig) : PABPC1 (poly(A) binding protein cytoplasmic 1)
more info ...
Related Pseudogenes: Pabpc1-ps1  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0775,409,581 - 75,421,874 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0775,557,634 - 75,569,927 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4772,116,140 - 72,128,433 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1772,136,510 - 72,149,407 (-)NCBI
Celera764,857,404 - 64,869,695 (-)NCBICelera
Cytogenetic Map7q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Pabpc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 619838
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-05-07
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.