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Gene: Pcdh12 (protocadherin 12) Rattus norvegicus
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Symbol: Pcdh12
Name: protocadherin 12
Description: Predicted to have calcium ion binding activity. Predicted to be involved in several processes, including calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules; glycogen metabolic process; and homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to localize to the cell-cell junction and integral component of plasma membrane. Orthologous to human PCDH12 (protocadherin 12); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; graphite.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: protocadherin-12; vascular endothelial cadherin 2
Orthologs:
Homo sapiens (human) : PCDH12 (protocadherin 12)  HGNC  Alliance
Mus musculus (house mouse) : Pcdh12 (protocadherin 12)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pcdh12 (protocadherin 12)
Pan paniscus (bonobo/pygmy chimpanzee) : PCDH12 (protocadherin 12)
Canis lupus familiaris (dog) : PCDH12 (protocadherin 12)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pcdh12 (protocadherin 12)
Sus scrofa (pig) : PCDH12 (protocadherin 12)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01831,415,533 - 31,431,108 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01831,095,554 - 31,111,129 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41831,197,338 - 31,212,869 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11831,238,150 - 31,238,247 (-)NCBI
Celera1829,744,538 - 29,760,113 (-)NCBICelera
Cytogenetic Map18p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Pcdh12
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 619917
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.