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Gene: Pabpn1 (poly(A) binding protein, nuclear 1) Rattus norvegicus
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Symbol: Pabpn1
Name: poly(A) binding protein, nuclear 1
Description: Predicted to have RNA polymerase binding activity. Predicted to be involved in several processes, including cellular response to lipopolysaccharide; poly(A)+ mRNA export from nucleus; and positive regulation of polynucleotide adenylyltransferase activity. Localizes to the nuclear inclusion body. Human ortholog(s) of this gene implicated in oculopharyngeal muscular dystrophy. Orthologous to human PABPN1 (poly(A) binding protein nuclear 1); PARTICIPATES IN 3'-end pre-mRNA processing pathway; influenza A pathway; mRNA decay pathway; INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: polyadenylate-binding protein 2
Orthologs:
Homo sapiens (human) : PABPN1 (poly(A) binding protein nuclear 1)  HGNC  Alliance
Mus musculus (house mouse) : Pabpn1 (poly(A) binding protein, nuclear 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pabpn1 (poly(A) binding protein nuclear 1)
Canis lupus familiaris (dog) : PABPN1 (poly(A) binding protein nuclear 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pabpn1 (poly(A) binding protein nuclear 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01533,555,640 - 33,560,251 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1533,555,640 - 33,560,242 (+)Ensembl
Rnor_5.01537,442,586 - 37,447,197 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41532,994,493 - 32,999,104 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11533,010,489 - 33,011,858 (+)NCBI
Celera1527,945,909 - 27,950,520 (+)NCBICelera
Cytogenetic Map15p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pabpn1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 619928
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.