Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Prdm4 (PR/SET domain 4) Rattus norvegicus
Analyze
Symbol: Prdm4
Name: PR/SET domain 4
Description: Exhibits death receptor binding activity. Involved in several processes, including cellular response to nutrient; negative regulation of cell growth; and regulation of stem cell differentiation. Localizes to the cytoplasm and nucleus. Orthologous to human PRDM4 (PR/SET domain 4); PARTICIPATES IN neurotrophic factor signaling pathway; INTERACTS WITH (+)-schisandrin B; 1-naphthyl isothiocyanate; dibutyl phthalate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: PR domain 4; PR domain containing 4; PR domain zinc finger protein 4; PR domain-containing protein 4; SC-1
Orthologs:
Homo sapiens (human) : PRDM4 (PR/SET domain 4)  HGNC  Alliance
Mus musculus (house mouse) : Prdm4 (PR domain containing 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Prdm4 (PR/SET domain 4)
Pan paniscus (bonobo/pygmy chimpanzee) : PRDM4 (PR/SET domain 4)
Canis lupus familiaris (dog) : PRDM4 (PR/SET domain 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Prdm4 (PR/SET domain 4)
Sus scrofa (pig) : PRDM4 (PR/SET domain 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0723,959,932 - 23,986,535 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl723,960,378 - 23,985,525 (+)Ensembl
Rnor_5.0724,109,460 - 24,136,615 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4720,096,859 - 20,117,628 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1720,110,929 - 20,131,701 (+)NCBI
Celera715,190,862 - 15,211,498 (+)NCBICelera
Cytogenetic Map7q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Prdm4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 619929
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.