Gene: Cspg4 (chondroitin sulfate proteoglycan 4) Rattus norvegicus
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Symbol: Cspg4
Name: chondroitin sulfate proteoglycan 4
Description: Exhibits collagen binding activity; involved in generation of neurons, inflammatory response, and response to lithium ion; localizes to the plasma membrane; biomarker of brain ischemia; orthologous to human CSPG4 (chondroitin sulfate proteoglycan 4); INTERACTS WITH 1,2,4-trimethylbenzene; 1,2-dimethylhydrazine; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: chondroitin sulfate proteoglycan NG2; HSN tumor-specific antigen; membrane-spanning proteoglycan NG2; Ng2
Orthologs:
Homo sapiens (human) : CSPG4 (chondroitin sulfate proteoglycan 4)  HGNC  Alliance
Mus musculus (house mouse) : Cspg4 (chondroitin sulfate proteoglycan 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cspg4 (chondroitin sulfate proteoglycan 4)
Pan paniscus (bonobo/pygmy chimpanzee) : CSPG4 (chondroitin sulfate proteoglycan 4)
Canis lupus familiaris (dog) : CSPG4 (chondroitin sulfate proteoglycan 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cspg4 (chondroitin sulfate proteoglycan 4)
Sus scrofa (pig) : CSPG4 (chondroitin sulfate proteoglycan 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0861,532,465 - 61,567,510 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0860,101,160 - 60,136,205 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4860,610,835 - 60,645,877 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1860,629,888 - 60,664,931 (+)NCBI
Celera856,733,067 - 56,768,114 (+)NCBICelera
Cytogenetic Map8q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Cspg4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 619942
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.