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Gene: Trnau1ap (tRNA selenocysteine 1 associated protein 1) Rattus norvegicus
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Symbol: Trnau1ap
Name: tRNA selenocysteine 1 associated protein 1
Description: Exhibits tRNA binding activity. Predicted to be involved in selenocysteine incorporation. Predicted to localize to nucleus. Orthologous to human TRNAU1AP (tRNA selenocysteine 1 associated protein 1); INTERACTS WITH 2,4-dinitrotoluene; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC100365522; LOC682894; Secp43; similar to tRNA selenocysteine associated protein; tRNA selenocysteine 1-associated protein 1; tRNA selenocysteine 1-associated protein 1-like; tRNA selenocysteine associated protein; tRNA selenocysteine-associated protein 1; Trspap1
Orthologs:
Homo sapiens (human) : TRNAU1AP (tRNA selenocysteine 1 associated protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Trnau1ap (tRNA selenocysteine 1 associated protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trnau1ap (tRNA selenocysteine 1 associated protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : TRNAU1AP (tRNA selenocysteine 1 associated protein 1)
Canis lupus familiaris (dog) : TRNAU1AP (tRNA selenocysteine 1 associated protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trnau1ap (tRNA selenocysteine 1 associated protein 1)
Sus scrofa (pig) : TRNAU1AP (tRNA selenocysteine 1 associated protein 1)
Chlorocebus sabaeus (African green monkey) : TRNAU1AP (tRNA selenocysteine 1 associated protein 1)
Heterocephalus glaber (naked mole-rat) : Trnau1ap (tRNA selenocysteine 1 associated protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05150,463,797 - 150,506,803 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5150,492,587 - 150,506,871 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05154,130,938 - 154,173,989 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera5142,939,711 - 142,954,467 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Trnau1ap
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 619995
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.