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Gene: Chd4 (chromodomain helicase DNA binding protein 4) Rattus norvegicus
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Symbol: Chd4
Name: chromodomain helicase DNA binding protein 4
Description: Predicted to have RNA polymerase II repressing transcription factor binding activity and histone deacetylase binding activity. Involved in negative regulation of transcription by RNA polymerase II and terminal button organization. Predicted to localize to the cytoplasm; intracellular non-membrane-bounded organelle; and protein-DNA complex. Orthologous to human CHD4 (chromodomain helicase DNA binding protein 4); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; INTERACTS WITH 2,6-dinitrotoluene; bisphenol A; cefaloridine.
Type: protein-coding
RefSeq Status: MODEL
Also known as: chromodomain-helicase-DNA-binding protein 4; LOC312712; Mi-2; Mi-2 autoantigen
Orthologs:
Homo sapiens (human) : CHD4 (chromodomain helicase DNA binding protein 4)  HGNC  Alliance
Mus musculus (house mouse) : Chd4 (chromodomain helicase DNA binding protein 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Chd4 (chromodomain helicase DNA binding protein 4)
Pan paniscus (bonobo/pygmy chimpanzee) : CHD4 (chromodomain helicase DNA binding protein 4)
Canis lupus familiaris (dog) : CHD4 (chromodomain helicase DNA binding protein 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Chd4 (chromodomain helicase DNA binding protein 4)
Sus scrofa (pig) : CHD4 (chromodomain helicase DNA binding protein 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04157,612,531 - 157,645,660 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04224,629,754 - 224,662,856 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44161,217,964 - 161,251,018 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14161,480,832 - 161,480,988 (+)NCBI
Celera4146,635,417 - 146,668,476 (+)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Chd4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620064
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.