Gene: Pou4f1 (POU class 4 homeobox 1) Rattus norvegicus
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Symbol: Pou4f1
Name: POU class 4 homeobox 1
Description: Predicted to have several functions, including DNA-binding transcription activator activity, RNA polymerase II-specific, nucleic acid binding activity, and transcription coregulator activity; involved in negative regulation of neuron apoptotic process and spermatogenesis; predicted to localize to the cytoplasm, neuron projection, and nuclear chromatin; orthologous to human POU4F1 (POU class 4 homeobox 1); PARTICIPATES IN p53 signaling pathway; INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; lead diacetate.
Type: protein-coding
RefSeq Status: MODEL
Also known as: brain-3A; brain-specific homeobox/POU domain protein 3A; brn-3A; Brn3a; LOW QUALITY PROTEIN: POU domain, class 4, transcription factor 1; POU domain, class 4, transcription factor 1
Orthologs:
Homo sapiens (human) : POU4F1 (POU class 4 homeobox 1)  HGNC  Alliance
Mus musculus (house mouse) : Pou4f1 (POU domain, class 4, transcription factor 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pou4f1 (POU class 4 homeobox 1)
Pan paniscus (bonobo/pygmy chimpanzee) : POU4F1 (POU class 4 homeobox 1)
Canis lupus familiaris (dog) : POU4F1 (POU class 4 homeobox 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pou4f1 (POU class 4 homeobox 1)
Sus scrofa (pig) : POU4F1 (POU class 4 homeobox 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01588,618,255 - 88,622,712 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01592,114,015 - 92,118,240 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41588,535,625 - 88,539,256 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11588,553,052 - 88,553,272 (-)NCBI
Celera1580,380,878 - 80,387,018 (-)NCBICelera
Cytogenetic Map15q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pou4f1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620074
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.