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Gene: Pou4f1 (POU class 4 homeobox 1) Rattus norvegicus
Symbol: Pou4f1
Name: POU class 4 homeobox 1
Description: Exhibits RNA polymerase II repressing transcription factor binding activity. Involved in negative regulation of neuron apoptotic process and spermatogenesis. Predicted to localize to cytoplasm; neuron projection; and nucleus. Orthologous to human POU4F1 (POU class 4 homeobox 1); PARTICIPATES IN p53 signaling pathway; INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; lead diacetate.
Type: protein-coding
RefSeq Status: MODEL
Also known as: brain-3A; brain-specific homeobox/POU domain protein 3A; brn-3A; Brn3a; LOW QUALITY PROTEIN: POU domain, class 4, transcription factor 1; POU domain, class 4, transcription factor 1
Homo sapiens (human) : POU4F1 (POU class 4 homeobox 1)  HGNC  Alliance
Mus musculus (house mouse) : Pou4f1 (POU domain, class 4, transcription factor 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pou4f1 (POU class 4 homeobox 1)
Pan paniscus (bonobo/pygmy chimpanzee) : POU4F1 (POU class 4 homeobox 1)
Canis lupus familiaris (dog) : POU4F1 (POU class 4 homeobox 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pou4f1 (POU class 4 homeobox 1)
Sus scrofa (pig) : POU4F1 (POU class 4 homeobox 1)
Chlorocebus sabaeus (African green monkey) : POU4F1 (POU class 4 homeobox 1)
Heterocephalus glaber (naked mole-rat) : Pou4f1 (POU class 4 homeobox 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.01588,618,255 - 88,622,712 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1588,620,470 - 88,622,413 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01592,114,015 - 92,118,240 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41588,535,625 - 88,539,256 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11588,553,052 - 88,553,272 (-)NCBI
Celera1580,380,878 - 80,387,018 (-)NCBICelera
Cytogenetic Map15q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Pou4f1
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620074
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-03-31
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.