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Gene: Lst1 (leukocyte specific transcript 1) Rattus norvegicus
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Symbol: Lst1
Name: leukocyte specific transcript 1
Description: Predicted to be involved in dendrite development and negative regulation of lymphocyte proliferation. Predicted to localize to the cytoplasm and integral component of membrane. Orthologous to human LST1 (leukocyte specific transcript 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; ammonium chloride; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: B144; leucocyte specific transcript 1
Orthologs:
Homo sapiens (human) : LST1 (leukocyte specific transcript 1)  HGNC  Alliance
Mus musculus (house mouse) : Lst1 (leukocyte specific transcript 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lst1 (leukocyte specific transcript 1)
Pan paniscus (bonobo/pygmy chimpanzee) : LST1 (leukocyte specific transcript 1)
Canis lupus familiaris (dog) : LST1 (leukocyte specific transcript 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lst1 (leukocyte specific transcript 1)
Sus scrofa (pig) : LST1 (leukocyte specific transcript 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0205,175,213 - 5,179,352 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0207,248,563 - 7,252,609 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4203,698,568 - 3,701,564 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1203,698,794 - 3,701,713 (+)NCBI
Celera204,387,819 - 4,391,014 (-)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Lst1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620077
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.