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Gene: Atp5pd (ATP synthase peripheral stalk subunit d) Rattus norvegicus
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Symbol: Atp5pd
Name: ATP synthase peripheral stalk subunit d
Description: Predicted to contribute to ATPase activity and proton-transporting ATP synthase activity, rotational mechanism. Involved in ATP metabolic process and cellular response to peptide. Localizes to the mitochondrial proton-transporting ATP synthase complex, coupling factor F(o). Used to study mental depression. Biomarker of congenital hypothyroidism. Orthologous to human ATP5PD (ATP synthase peripheral stalk subunit d); PARTICIPATES IN Alzheimer's disease pathway; Huntington's disease pathway; oxidative phosphorylation pathway; INTERACTS WITH (+)-menthofuran; 1,2,4-trimethylbenzene; 1-bromopropane.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: ATP synthase subunit d; ATP synthase subunit d, mitochondrial; ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d; ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d; Atp5h; Atp5jd; ATPase subunit d; ATPQ
Orthologs:
Homo sapiens (human) : ATP5PD (ATP synthase peripheral stalk subunit d)  HGNC  Alliance
Mus musculus (house mouse) : Atp5h (ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atp5pd (ATP synthase peripheral stalk subunit d)
Pan paniscus (bonobo/pygmy chimpanzee) : ATP5PD (ATP synthase peripheral stalk subunit d)
Canis lupus familiaris (dog) : LOC100683871 (ATP synthase subunit d, mitochondrial-like)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atp5pd (ATP synthase peripheral stalk subunit d)
Sus scrofa (pig) : ATP5PD (ATP synthase peripheral stalk subunit d)
more info ...
Related Pseudogenes: Atp5h-ps1  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.010103,967,340 - 103,972,552 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.010104,306,420 - 104,330,303 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410105,474,107 - 105,499,413 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15172,421,360 - 172,421,928 (-)NCBI
Celera1099,232,881 - 99,238,044 (-)NCBICelera
Cytogenetic Map10q32.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Atp5pd
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620083
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.