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Gene: Cxcr5 (C-X-C motif chemokine receptor 5) Rattus norvegicus
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Symbol: Cxcr5
Name: C-X-C motif chemokine receptor 5
Description: Predicted to have C-C chemokine binding activity and C-C chemokine receptor activity. Predicted to be involved in several processes, including leukocyte chemotaxis; lymph node development; and positive regulation of cytosolic calcium ion concentration. Predicted to localize to the external side of plasma membrane. Orthologous to human CXCR5 (C-X-C motif chemokine receptor 5); PARTICIPATES IN chemokine mediated signaling pathway; cytokine mediated signaling pathway; INTERACTS WITH 3H-1,2-dithiole-3-thione; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Blr1; Burkitt lymphoma receptor 1; burkitt lymphoma receptor 1 homolog; C-X-C chemokine receptor type 5; chemochine (C-X-C motif) receptor 5; chemokine (C-X-C motif) receptor 5; CXC-R5; CXCR-5; neurolymphatic receptor; NLR
Orthologs:
Homo sapiens (human) : CXCR5 (C-X-C motif chemokine receptor 5)  HGNC  Alliance
Mus musculus (house mouse) : Cxcr5 (chemokine (C-X-C motif) receptor 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cxcr5 (C-X-C motif chemokine receptor 5)
Pan paniscus (bonobo/pygmy chimpanzee) : CXCR5 (C-X-C motif chemokine receptor 5)
Canis lupus familiaris (dog) : CXCR5 (C-X-C motif chemokine receptor 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cxcr5 (C-X-C motif chemokine receptor 5)
Sus scrofa (pig) : CXCR5 (C-X-C motif chemokine receptor 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0848,835,688 - 48,852,032 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0847,454,074 - 47,470,348 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4847,485,125 - 47,498,509 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1847,493,890 - 47,494,999 (-)NCBI
Celera844,428,390 - 44,441,750 (-)NCBICelera
Cytogenetic Map8q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Cxcr5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 62010
Created: 2001-04-11
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.