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Gene: Syt6 (synaptotagmin 6) Rattus norvegicus
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Symbol: Syt6
Name: synaptotagmin 6
Description: Exhibits syntaxin binding activity. Involved in presynaptic dense core vesicle exocytosis. Localizes to glutamatergic synapse and integral component of synaptic membrane. Orthologous to human SYT6 (synaptotagmin 6); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 6-propyl-2-thiouracil; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MGC116356; synaptotagmin VI; synaptotagmin-6; sytVI
Orthologs:
Homo sapiens (human) : SYT6 (synaptotagmin 6)  HGNC  Alliance
Mus musculus (house mouse) : Syt6 (synaptotagmin VI)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Syt6 (synaptotagmin 6)
Pan paniscus (bonobo/pygmy chimpanzee) : SYT6 (synaptotagmin 6)
Canis lupus familiaris (dog) : SYT6 (synaptotagmin 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Syt6 (synaptotagmin 6)
Sus scrofa (pig) : SYT6 (synaptotagmin 6)
Chlorocebus sabaeus (African green monkey) : SYT6 (synaptotagmin 6)
Heterocephalus glaber (naked mole-rat) : Syt6 (synaptotagmin 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02206,064,181 - 206,119,034 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2206,064,179 - 206,127,907 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02225,492,367 - 225,547,221 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42198,807,340 - 198,862,227 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12198,770,093 - 198,824,981 (+)NCBI
Celera2183,565,789 - 183,620,107 (+)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Syt6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 62012
Created: 2001-04-11
Species: Rattus norvegicus
Last Modified: 2020-03-31
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.