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Gene: Sf3b1 (splicing factor 3b, subunit 1) Rattus norvegicus
Symbol: Sf3b1
Name: splicing factor 3b, subunit 1
CRRD ID: 620148
Description: Predicted to have chromatin binding activity; mRNA binding activity; and splicing factor binding activity. Predicted to be involved in anterior/posterior pattern specification; blastocyst formation; and spliceosomal complex assembly. Localizes to nucleus. Human ortholog(s) of this gene implicated in myelodysplastic syndrome. Orthologous to human SF3B1 (splicing factor 3b subunit 1); PARTICIPATES IN spliceosome pathway; INTERACTS WITH 3H-1,2-dithiole-3-thione; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Sap155; splicing factor 3B subunit 1; splicing factor 3b, subunit 1, 155kD
Homo sapiens (human) : SF3B1 (splicing factor 3b subunit 1)  HGNC  Alliance
Mus musculus (house mouse) : Sf3b1 (splicing factor 3b, subunit 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sf3b1 (splicing factor 3b subunit 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SF3B1 (splicing factor 3b subunit 1)
Canis lupus familiaris (dog) : SF3B1 (splicing factor 3b subunit 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sf3b1 (splicing factor 3b subunit 1)
Sus scrofa (pig) : SF3B1 (splicing factor 3b subunit 1)
Chlorocebus sabaeus (African green monkey) : SF3B1 (splicing factor 3b subunit 1)
Heterocephalus glaber (naked mole-rat) : Sf3b1 (splicing factor 3b subunit 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0961,594,620 - 61,634,510 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl961,594,620 - 61,634,510 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0961,274,727 - 61,315,726 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4953,796,176 - 53,837,297 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1953,814,990 - 53,838,594 (-)NCBI
Celera953,974,888 - 54,014,648 (-)NCBICelera
Cytogenetic Map9q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Sf3b1
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620148
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-10-13
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.