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Gene: Mmp16 (matrix metallopeptidase 16) Rattus norvegicus
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Symbol: Mmp16
Name: matrix metallopeptidase 16
Description: Predicted to have metalloaminopeptidase activity; metalloendopeptidase activity; and zinc ion binding activity. Involved in response to odorant. Predicted to localize to the extracellular space and integral component of plasma membrane. Orthologous to human MMP16 (matrix metallopeptidase 16); INTERACTS WITH 17alpha-ethynylestradiol; 6-propyl-2-thiouracil; amitriptyline.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: matrix metalloproteinase 16; matrix metalloproteinase-16; membrane-type matrix metalloproteinase 3; membrane-type-3 matrix metalloproteinase; MMP-16; MT-MMP 3; Mt3-mmp; MT3MMP; MTMMP3
Orthologs:
Homo sapiens (human) : MMP16 (matrix metallopeptidase 16)  HGNC  Alliance
Mus musculus (house mouse) : Mmp16 (matrix metallopeptidase 16)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Mmp16 (matrix metallopeptidase 16)
Pan paniscus (bonobo/pygmy chimpanzee) : MMP16 (matrix metallopeptidase 16)
Canis lupus familiaris (dog) : MMP16 (matrix metallopeptidase 16)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Mmp16 (matrix metallopeptidase 16)
Sus scrofa (pig) : MMP16 (matrix metallopeptidase 16)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0531,568,344 - 31,818,368 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0536,239,463 - 36,484,341 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4532,352,311 - 32,586,469 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1532,352,489 - 32,586,648 (+)NCBI
Celera530,477,009 - 30,710,815 (+)NCBICelera
Cytogenetic Map5q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Candidate Gene Status
Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Mmp16
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620199
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.