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Gene: Higd1a (HIG1 hypoxia inducible domain family, member 1A) Rattus norvegicus
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Symbol: Higd1a
Name: HIG1 hypoxia inducible domain family, member 1A
Description: Predicted to be involved in several processes, including cellular response to glucose starvation; cellular response to hypoxia; and negative regulation of release of cytochrome c from mitochondria. Predicted to localize to the mitochondrial inner membrane; nucleoplasm; and protein-containing complex. Orthologous to human HIGD1A (HIG1 hypoxia inducible domain family member 1A); INTERACTS WITH 2,4-dinitrotoluene; 3,3',4,4',5-pentachlorobiphenyl; 3,3',5-triiodo-L-thyronine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Hig1; HIG1 domain family member 1A; HIG1 domain family member 1A, mitochondrial; HIG1 domain family, member 1A; Hig1-pending; hypoxia induced gene 1; hypoxia-inducible gene 1 protein
Orthologs:
Homo sapiens (human) : HIGD1A (HIG1 hypoxia inducible domain family member 1A)  HGNC  Alliance
Mus musculus (house mouse) : Higd1a (HIG1 domain family, member 1A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Higd1a (HIG1 hypoxia inducible domain family member 1A)
Pan paniscus (bonobo/pygmy chimpanzee) : HIGD1A (HIG1 hypoxia inducible domain family member 1A)
Canis lupus familiaris (dog) : HIGD1A (HIG1 hypoxia inducible domain family member 1A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Higd1a (HIG1 hypoxia inducible domain family member 1A)
Sus scrofa (pig) : HIGD1A (HIG1 hypoxia inducible domain family member 1A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08130,482,492 - 130,491,888 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8130,482,493 - 130,491,998 (-)Ensembl
Rnor_5.08129,660,254 - 129,669,650 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48127,076,654 - 127,085,885 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18127,096,390 - 127,105,621 (+)NCBI
Celera8120,638,935 - 120,648,165 (-)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Higd1a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620215
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.