Gene: Atp6v1b2 (ATPase H+ transporting V1 subunit B2) Rattus norvegicus
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Symbol: Atp6v1b2
Name: ATPase H+ transporting V1 subunit B2
Description: Predicted to have ATP binding activity and hydrolase activity; predicted to be involved in vacuolar acidification; localizes to the integral component of membrane; orthologous to human ATP6V1B2 (ATPase H+ transporting V1 subunit B2); PARTICIPATES IN oxidative phosphorylation pathway; phagocytosis pathway; rheumatoid arthritis pathway; INTERACTS WITH (RS)-amphetamine; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Atp6b1b2; Atp6b2; ATPase, H transporting, lysosomal V1 subunit B2; ATPase, H+ transporting, lysosomal (vacuolar proton pump), beta 56/58 kDa, isoform 2; ATPase, H+ transporting, V1 subunit B, isoform 2; endomembrane proton pump 58 kDa subunit; V-ATPase; V-ATPase subunit B 2; V-type proton ATPase subunit B, brain isoform; vacuolar H+ATPase B2; vacuolar proton pump subunit B 2; Vatb
Orthologs:
Homo sapiens (human) : ATP6V1B2 (ATPase H+ transporting V1 subunit B2)  HGNC  Alliance
Mus musculus (house mouse) : Atp6v1b2 (ATPase, H+ transporting, lysosomal V1 subunit B2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atp6v1b2 (ATPase H+ transporting V1 subunit B2)
Pan paniscus (bonobo/pygmy chimpanzee) : ATP6V1B2 (ATPase H+ transporting V1 subunit B2)
Canis lupus familiaris (dog) : ATP6V1B2 (ATPase H+ transporting V1 subunit B2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atp6v1b2 (ATPase H+ transporting V1 subunit B2)
Sus scrofa (pig) : ATP6V1B2 (ATPase H+ transporting V1 subunit B2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01622,326,537 - 22,350,143 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01622,221,011 - 22,244,664 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41622,320,425 - 22,344,445 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11622,320,425 - 22,344,443 (-)NCBI
Celera1620,593,372 - 20,617,306 (-)NCBICelera
Cytogenetic Map16p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Atp6v1b2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620284
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.