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Gene: Abcf1 (ATP binding cassette subfamily F member 1) Rattus norvegicus
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Symbol: Abcf1
Name: ATP binding cassette subfamily F member 1
Description: Predicted to have ATP binding activity; ribosome binding activity; and translation activator activity. Predicted to be involved in positive regulation of translation and translational initiation. Localizes to the ribosome. Orthologous to human ABCF1 (ATP binding cassette subfamily F member 1); INTERACTS WITH 17alpha-ethynylestradiol; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Abc50; ATP-binding cassette 50; ATP-binding cassette sub-family F member 1; ATP-binding cassette, sub-family F (GCN20), member 1; ATP-binding cassette, subfamily F (GCN20), member 1
Orthologs:
Homo sapiens (human) : ABCF1 (ATP binding cassette subfamily F member 1)  HGNC  Alliance
Mus musculus (house mouse) : Abcf1 (ATP-binding cassette, sub-family F (GCN20), member 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Abcf1 (ATP binding cassette subfamily F member 1)
Pan paniscus (bonobo/pygmy chimpanzee) : ABCF1 (ATP binding cassette subfamily F member 1)
Canis lupus familiaris (dog) : ABCF1 (ATP binding cassette subfamily F member 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Abcf1 (ATP binding cassette subfamily F member 1)
Sus scrofa (pig) : ABCF1 (ATP binding cassette subfamily F member 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0203,309,914 - 3,322,828 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0205,407,475 - 5,420,356 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4202,953,604 - 2,962,140 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1202,953,831 - 2,962,361 (+)NCBI
Celera20228,398 - 241,279 (+)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Abcf1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620286
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.