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Gene: Trim28 (tripartite motif-containing 28) Rattus norvegicus
Symbol: Trim28
Name: tripartite motif-containing 28
Description: Predicted to contribute to sequence-specific DNA binding activity. Predicted to be involved in several processes, including DNA metabolic process; negative regulation of viral life cycle; and regulation of nucleobase-containing compound metabolic process. Predicted to localize to nucleus. Orthologous to human TRIM28 (tripartite motif containing 28); PARTICIPATES IN p53 signaling pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: E3 SUMO-protein ligase TRIM28; Kap1; KRAB-associated protein 1; Krip1; nuclear corepressor KAP-1; RING-type E3 ubiquitin transferase TIF1-beta; TIF1-beta; Tif1b; transcription intermediary factor 1-beta; tripartite motif protein 28; tripartite motif-containing protein 28
Homo sapiens (human) : TRIM28 (tripartite motif containing 28)  HGNC  Alliance
Mus musculus (house mouse) : Trim28 (tripartite motif-containing 28)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trim28 (tripartite motif containing 28)
Pan paniscus (bonobo/pygmy chimpanzee) : TRIM28 (tripartite motif containing 28)
Canis lupus familiaris (dog) : TRIM28 (tripartite motif containing 28)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trim28 (tripartite motif containing 28)
Sus scrofa (pig) : TRIM28 (tripartite motif containing 28)
Chlorocebus sabaeus (African green monkey) : TRIM28 (tripartite motif containing 28)
Heterocephalus glaber (naked mole-rat) : Trim28 (tripartite motif containing 28)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0165,544,369 - 65,551,043 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl165,544,373 - 65,551,043 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0166,355,602 - 66,362,276 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4172,892,399 - 72,899,070 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1172,973,571 - 72,973,906 (-)NCBI
Celera160,180,424 - 60,187,048 (-)NCBICelera
Cytogenetic Map1q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
More on Trim28
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620289
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-05-05
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.