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Gene: Snx16 (sorting nexin 16) Rattus norvegicus
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Symbol: Snx16
Name: sorting nexin 16
Description: Predicted to have identical protein binding activity and phosphatidylinositol binding activity. Involved in early endosome to late endosome transport. Predicted to localize to the endosome; intracellular membrane-bounded organelle; and plasma membrane. Orthologous to human SNX16 (sorting nexin 16); INTERACTS WITH 2,4-dinitrotoluene; 2-ethoxyethanol; 2-methoxyethanol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: sorting nexin-16
Orthologs:
Homo sapiens (human) : SNX16 (sorting nexin 16)  HGNC  Alliance
Mus musculus (house mouse) : Snx16 (sorting nexin 16)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Snx16 (sorting nexin 16)
Pan paniscus (bonobo/pygmy chimpanzee) : SNX16 (sorting nexin 16)
Canis lupus familiaris (dog) : SNX16 (sorting nexin 16)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Snx16 (sorting nexin 16)
Sus scrofa (pig) : SNX16 (sorting nexin 16)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0293,518,796 - 93,541,056 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02113,278,384 - 113,299,936 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4293,274,839 - 93,296,194 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1293,219,800 - 93,241,151 (+)NCBI
Celera286,938,630 - 86,959,946 (+)NCBICelera
Cytogenetic Map2q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Snx16
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620295
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.