Gene: Nptn (neuroplastin) Rattus norvegicus
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Symbol: Nptn
Name: neuroplastin
Description: Exhibits cell adhesion molecule binding activity, ion channel binding activity, and type 1 fibroblast growth factor receptor binding activity; involved in several processes, including homophilic cell adhesion via plasma membrane adhesion molecules, modulation of chemical synaptic transmission, and positive regulation of cell communication; localizes to several cellular components, including the GABA-ergic synapse, Schaffer collateral - CA1 synapse, and intrinsic component of plasma membrane; orthologous to human NPTN (neuroplastin); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: glycoprotein 55; glycoprotein 55/65; glycoprotein 65; gp55/65; Sdfr1; SDR-1; stromal cell derived factor receptor 1; stromal cell-derived receptor 1
Orthologs:
Homo sapiens (human) : NPTN (neuroplastin)  HGNC  Alliance
Mus musculus (house mouse) : Nptn (neuroplastin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nptn (neuroplastin)
Pan paniscus (bonobo/pygmy chimpanzee) : NPTN (neuroplastin)
Canis lupus familiaris (dog) : NPTN (neuroplastin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nptn (neuroplastin)
Sus scrofa (pig) : NPTN (neuroplastin)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0863,379,062 - 63,445,694 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0863,149,031 - 63,215,298 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4862,389,893 - 62,466,128 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1862,408,946 - 62,485,178 (+)NCBI
Celera858,456,063 - 58,522,680 (+)NCBICelera
Cytogenetic Map8q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Nptn
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620296
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.