Gene: Ecm1 (extracellular matrix protein 1) Rattus norvegicus
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Symbol: Ecm1
Name: extracellular matrix protein 1
Description: Predicted to have several functions, including interleukin-2 receptor binding activity, laminin binding activity, and protease binding activity; predicted to be involved in several processes, including chondrocyte development, endochondral bone growth, and inflammatory response; predicted to localize to the collagen-containing extracellular matrix and extracellular space; orthologous to human ECM1 (extracellular matrix protein 1); INTERACTS WITH 17alpha-ethynylestradiol; 3,3',4,4',5-pentachlorobiphenyl; 3-chloropropane-1,2-diol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: secretory component p85
Orthologs:
Homo sapiens (human) : ECM1 (extracellular matrix protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Ecm1 (extracellular matrix protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ecm1 (extracellular matrix protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : ECM1 (extracellular matrix protein 1)
Canis lupus familiaris (dog) : ECM1 (extracellular matrix protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ecm1 (extracellular matrix protein 1)
Sus scrofa (pig) : ECM1 (extracellular matrix protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02197,855,468 - 197,860,973 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02217,345,268 - 217,350,509 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42190,525,156 - 190,530,323 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12190,489,759 - 190,489,956 (-)NCBI
Celera2175,817,503 - 175,822,670 (-)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ecm1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620357
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.