Gene: Efna1 (ephrin A1) Rattus norvegicus
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Symbol: Efna1
Name: ephrin A1
Description: Predicted to have ephrin receptor binding activity; predicted to be involved in several processes, including animal organ development, nervous system development, and regulation of protein metabolic process; predicted to localize to the anchored component of plasma membrane; orthologous to human EFNA1 (ephrin A1); PARTICIPATES IN altered ephrin - ephrin receptor bidirectional signaling pathway; E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: B61; EPH-related receptor tyrosine kinase ligand 1; ephrin-A1; immediate early response protein B61; LERK-1
Orthologs:
Homo sapiens (human) : EFNA1 (ephrin A1)  HGNC  Alliance
Mus musculus (house mouse) : Efna1 (ephrin A1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Efna1 (ephrin A1)
Pan paniscus (bonobo/pygmy chimpanzee) : EFNA1 (ephrin A1)
Canis lupus familiaris (dog) : EFNA1 (ephrin A1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Efna1 (ephrin A1)
Sus scrofa (pig) : EFNA1 (ephrin A1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02188,588,808 - 188,596,156 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02208,002,153 - 208,010,763 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42181,444,599 - 181,451,944 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12181,394,706 - 181,402,050 (-)NCBI
Celera2168,623,896 - 168,631,240 (-)NCBICelera
Cytogenetic Map2q34NCBI
RH 3.4 Map21155.2RGD
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Efna1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 620388
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.